BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018C06SP1|AL427287
(1025 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1765 1856 0.0
>3x_Contig1765
Length = 24733
Score = 1856 bits (932), Expect = 0.0
Identities = 992/1007 (98%), Gaps = 8/1007 (0%)
Strand = Plus / Minus
Query: 16 aaaaataatactatctctcaaagattctaacaatggtctacggttaaatcgcaatgatcc 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21273 aaaaataatactatctctcaaagattctaacaatggtctacggttaaatcgcaatgatcc 21214
Query: 76 tacttggatccaggataggtttttaactctctctcttcagttttctaacaacatctgtat 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21213 tacttggatccaggataggtttttaactctctctcttcagttttctaacaacatctgtat 21154
Query: 136 gctagagatgttgtccaggcttaataaagatccttttggaacactcttatcaggtgaaga 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21153 gctagagatgttgtccaggcttaataaagatccttttggaacactcttatcaggtgaaga 21094
Query: 196 acagaaatttaagacactgcagaacattctcaagtccttggctgtctacacacgattaac 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21093 acagaaatttaagacactgcagaacattctcaagtccttggctgtctacacacgattaac 21034
Query: 256 taagcatactgaagagaatgtactcaaattctatgaagatattcgtagcagcaatttacc 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21033 taagcatactgaagagaatgtactcaaattctatgaagatattcgtagcagcaatttacc 20974
Query: 316 aagttatccgtttttccgagtkgttgaaacggtattaaggtctagactttcctttaagga 375
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 20973 aagttatccgtttttccgagttgttgaaacggtattaaggtctagactttcctttaagga 20914
Query: 376 ttgtttacaggaagtactcgtggagcgtttgaagggtctgacaaaagactttgggtcttt 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20913 ttgtttacaggaagtactcgtggagcgtttgaagggtctgacaaaagactttgggtcttt 20854
Query: 436 ctataggaaatatgaatccgagcttcgagcccagacttgccttgactcctctgaattttc 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20853 ctataggaaatatgaatccgagcttcgagcccagacttgccttgactcctctgaattttc 20794
Query: 496 aattgtattgaaaacaacgatattaggagctggatttggtgatcaagttgaaaagcacac 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20793 aattgtattgaaaacaacgatattaggagctggatttggtgatcaagttgaaaagcacac 20734
Query: 556 cttggatttgttctataccttcttaatttctgaattgctacctacgctaaggagatcaat 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20733 cttggatttgttctataccttcttaatttctgaattgctacctacgctaaggagatcaat 20674
Query: 616 tatcttgctgaaggccttaaagcaatttatgacagggggggatgatttagattttratga 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 20673 tatcttgctgaaggccttaaagcaatttatgacagggggggatgatttagattttaatga 20614
Query: 676 aaaagatgtgctgagtggtagccttacttccgaaagcaaagaaaaacatttccatctttt 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20613 aaaagatgtgctgagtggtagccttacttccgaaagcaaagaaaaacatttccatctttt 20554
Query: 736 gataagatttttgctccagactgatttttatgacttgttgatgaattcgcattctcctct 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20553 gataagatttttgctccagactgatttttatgacttgttgatgaattcgcattctcctct 20494
Query: 796 ctcccctgaaagctccttggttaatgctccacatgagtwctgcagtatcatcaaattaac 855
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 20493 ctcccctgaaagctccttggttaatgctccacatgagtactgcagtatcatcaaattaac 20434
Query: 856 cgatttagcaactcatttgaatacttatgtgactaataataaaaacattactttgcgtga 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20433 cgatttagcaactcatttgaatacttatgtgactaataataaaaacattactttgcgtga 20374
Query: 916 agagaatgatc--aaaawtag-aatactgtc-acagacttgattat-aaawttgtttgat 970
||||||||||| |||| ||| ||||||||| |||||||||||||| ||| |||||||||
Sbjct: 20373 agagaatgatcaaaaaattagaaatactgtcaacagacttgattataaaatttgtttgat 20314
Query: 971 atgtgg-ggyaaga-tcacgcacgtacagatggcc-tgaaatgcaaa 1014
|||||| | |||| |||||||||||||||||||| |||||||||||
Sbjct: 20313 atgtggtgtcaagattcacgcacgtacagatggccttgaaatgcaaa 20267
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7244
Number of Sequences: 1807
Number of extensions: 7244
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 1025
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1009
effective length of database: 10,329,639
effective search space: 10422605751
effective search space used: 10422605751
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)